The Bioinformatics Laboratory has a close collaboration with the Core Facility Metabolomics (CFM) headed by Dr. Frederic Vaz. Together with the CFM we develop methods for the bioinformatics analysis of complex metabolomics/lipidomics LC-MS data. We mainly focus on the pre-processing of the LC-MS data, the annotation of the metabolites in the datasets, and the presentation/visualization of the data.
If you have performed your experiment at the Amsterdam UMC metabolomics facility, then we will automatically receive and analyze your data. If you have data from another facility that needs analyzing then contact dr. Adrie Dane for further information.